Publications


26.

Assessment of the performance of the Ames MPF™ assay: A multicenter collaborative study with six coded chemicals

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2024_Spiliotopoulos.pdf
Adobe Acrobat Document 4.1 MB

25.

Identification of a BAZ2A-bromodomain hit compound by fragment growing

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24.

Hitting a moving target: simulation and crystallography study of ATAD2 bromodomain blockers

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2020_Dolbois.pdf
Adobe Acrobat Document 1.9 MB

23.

Assessment of the miniaturized liquid Ames Microplate Format (MPF) for a selection of the test items from the recommended list of genotoxic and non-genotoxic chemicals

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2020_Spiliotopoulos.pdf
Adobe Acrobat Document 938.6 KB

22.

Understanding the mechanism of action of pyrrolo[3,2-b]quinoxaline-derivatives as kinase inhibitors

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2020_Unzue.pdf
Adobe Acrobat Document 3.8 MB

21.

Ligand Retargeting by Binding Site Analogy

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2019_Wiedmer.pdf
Adobe Acrobat Document 3.8 MB

20.

Structural Analysis of Small Molecule Binding to the BAZ2A and
BAZ2B Bromodomains

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2018_DalleVedove.pdf
Adobe Acrobat Document 3.2 MB

19.

Chemical Space Expansion of Bromodomain Ligands Guided by in Silico Virtual Couplings (AutoCouple)

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acscentsci.7b00401.pdf
Adobe Acrobat Document 712.5 KB

18.

Discovery of BAZ2A Bromodomain Ligands

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2017_BAZ2A.pdf
Adobe Acrobat Document 7.8 MB

17.

Virtual screen to NMR (VS2NMR): Discovery of fragment hits for the CBP bromodomain

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15745312.pdf
Adobe Acrobat Document 2.7 MB

16.

dMM-PBSA:ANewHADDOCKScoringFunctionforProtein-PeptideDocking

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27630991.pdf
Adobe Acrobat Document 955.1 KB

15.

Fragment-based in silico screening of bromodomain ligands

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19847214.pdf
Adobe Acrobat Document 1.4 MB

14.

Structural basis for PHDVC5HCHNSD1-C2HRNizp1 interaction: implications for Sotos syndrome

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26896805.pdf
Adobe Acrobat Document 5.5 MB

13.

Fragment-based design of selective nanomolar ligands of the CREBBP bromodomain

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2015_CBPb.pdf
Adobe Acrobat Document 10.1 MB

12.

Discovery of CREBBP bromodomain inhibitors by high-throughput docking and hit optimization guided by Molecular Dynamics

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2015_CBPa.pdf
Adobe Acrobat Document 2.3 MB

11.

GMXPBSA 2.1: A GROMACS tool to perform MM/PBSA and computational alanine scanning 

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GMXPBSA_2.1_A_GROMACS_tool_to_perform_MM
Adobe Acrobat Document 444.2 KB

10.

Structural analysis of the binding of type I, I1/2, and II inhibitors to Eph tyrosine kinases

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2014_Eph.pdf
Adobe Acrobat Document 4.7 MB

9.

Molecular Dynamics simulations of bromodomains reveal binding‐site flexibility and multiple binding modes of the natural ligand acetyl‐lysine

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Spiliotopoulos_et_al-2014-Israel_Journal
Adobe Acrobat Document 971.3 KB

8.

Discovery of BRD4 bromodomain inhibitors by fragment-based high-throughput docking

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2014_BRD41.pdf
Adobe Acrobat Document 1.3 MB

7.

GMXPBSA 2.0: A GROMACS tool to perform MM/PBSA and computational alanine scanning

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S0010465514002240.pdf
Adobe Acrobat Document 787.5 KB

6.

Identification of a novel de novo deletion in RAF1 associated with biventricular hypertrophy in Noonan syndrome

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24782337.pdf
Adobe Acrobat Document 413.9 KB

5.

muma, an R package for metabolomics univariate and multivariate statistical analysis

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muma.pdf
Adobe Acrobat Document 501.7 KB

4.

Exploring PHD fingers and H3K4me0 interactions with Molecular Dynamics simulations and binding free energy calculations: AIRE-PHD1, a case study

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journal.pone.0046902.pdf
Adobe Acrobat Document 713.3 KB

3.

AIRE-PHD fingers are structural hubs to maintain the integrity of chromatin-associated interactome

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23074189.pdf
Adobe Acrobat Document 12.9 MB

2.

A DNA-transposon-based approach to functional screening in Neural Stem cells

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20688113.pdf
Adobe Acrobat Document 1.2 MB

1.

An optimized experimental strategy for efficient conversion of embryonic stem (ES)-derived mouse neural stem (NS) cells into a nearly homogeneous mature neuronal population

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19236914.pdf
Adobe Acrobat Document 862.2 KB

Presentations


VS2NMR

Password: MaggieThatch3rIsASt0neColdF0x

Download
VS2NMR.pptx
Microsoft Power Point Presentation 10.1 MB
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VS2NMR.ppsx
Microsoft Power Point Presentation 10.1 MB

ProteinNMR

Password: MaggieThatch3rIsASt0neColdF0x

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ProteinNMR.pptx
Microsoft Power Point Presentation 4.4 MB
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ProteinNMR.ppsx
Microsoft Power Point Presentation 4.4 MB

Title

Password: MaggieThatch3rIsASt0neColdF0x


Documents


PhD Diplomas

Università Vita–Salute San Raffaele

Open University

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USR_PhD_DSpiliotopoulos.pdf
Adobe Acrobat Document 118.5 KB
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OU_PhD_DSpiliotopoulos (1).pdf
Adobe Acrobat Document 299.0 KB

Other papers


2.

Similarity of multiple dose-response curves in interlaboratory studies in regulatory toxicology

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arxPre20Sept2020.pdf
Adobe Acrobat Document 390.8 KB